Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB69191.1PspA/IM30 family protein; KEGG: phu:Phum_PHUM098460 6.7e-07 myosin-9, putative K10352; Psort location: CytoplasmicMembrane, score: 7.88. (229 aa)    
Predicted Functional Partners:
KXB62171.1
PspC domain protein.
  
 
 0.937
KXB69192.1
Hypothetical protein; KEGG: edi:EDI_289500 6.0e-06 cysteine-rich protein.
 
  
 0.906
KXB69190.1
Zinc finger domain protein, LSD1 subclass.
 
  
 0.861
KXB59959.1
Hypothetical protein; KEGG: tal:Thal_0218 4.2e-05 metal dependent phosphohydrolase K06950.
  
  
 0.560
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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