Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
KXB69193.1Antioxidant, AhpC/TSA family; KEGG: bqy:MUS_2131 5.2e-13 resA; protein-disulfide reductase. (166 aa)    
Predicted Functional Partners:
KXB64372.1
Redoxin family protein; KEGG: fnu:FN0803 6.2e-24 trifunctional thioredoxin/methionine sulfoxide reductase A/B protein K12267.
 
  
 0.755
KXB64373.1
KEGG: spy:SPy_1559 7.1e-41 ccdA; cytochrome C-type biogenesis protein K06196; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.715
KXB62184.1
dTMP kinase; KEGG: lba:Lebu_1702 8.3e-102 thymidylate kinase; K00943 dTMP kinase; Psort location: Cytoplasmic, score: 8.96.
   
   0.623
msrA-2
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.448
msrA
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.420
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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