Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB69105.1PRD domain protein; KEGG: cbj:H04402_02159 4.8e-74 putative transcriptional antiterminator, BglG family / PTS system, mannitol/fructose-specific IIA component; Psort location: Cytoplasmic, score: 8.96. (685 aa)    
Predicted Functional Partners:
PtxB
KEGG: lba:Lebu_1004 6.3e-40 PTS system lactose/cellobiose-specific transporter subunit IIB; K02822 PTS system, ascorbate-specific IIB component.
 
 
 0.995
KXB69104.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: lba:Lebu_1003 1.8e-65 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN; K02821 PTS system, ascorbate-specific IIA component; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
0.985
KXB69102.1
Putative sugar-specific permease, SgaT/UlaA; KEGG: sax:USA300HOU_0350 1.2e-139 ulaA; PTS system ascorbate-specific transporter subunit IIC K03475; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.942
KXB61933.1
Putative PTS system fructose-specific EIIABC component; KEGG: lba:Lebu_0567 2.8e-275 PTS system fructose subfamily transporter subunit IIC; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.776
KXB67924.1
Hypothetical protein; KEGG: lba:Lebu_2238 1.8e-16 PTS system beta-glucoside-specific transporter subunit IIABC; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757.
 
 
 0.769
KXB59955.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: str:Sterm_3758 4.2e-31 PTS system fructose subfamily transporter subunit IIC; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.748
KXB67252.1
Putative glucose-specific phosphotransferase enzyme IIA component; KEGG: lba:Lebu_1372 5.7e-55 PTS system glucose subfamily transporter subunit IIA; K02777 PTS system, glucose-specific IIA component; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.737
Crr
Putative glucose-specific phosphotransferase enzyme IIA component; KEGG: lba:Lebu_1372 1.7e-78 PTS system glucose subfamily transporter subunit IIA; K02777 PTS system, glucose-specific IIA component; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.737
KXB69101.1
Transketolase, thiamine diphosphate binding domain protein; KEGG: lba:Lebu_1006 2.2e-147 transketolase; K00615 transketolase; Psort location: Cytoplasmic, score: 9.97.
  
    0.561
PtsG
KEGG: smf:Smon_0267 2.7e-238 PTS system glucose-like transporter subunit IIB; K02790 PTS system, maltose and glucose-specific IIB component K02791; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.556
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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