Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB69113.1HaeIII restriction endonuclease; KEGG: bsa:Bacsa_1533 3.3e-91 type II site-specific deoxyribonuclease; Psort location: Cytoplasmic, score: 8.96. (318 aa)    
Predicted Functional Partners:
HaeIIIM
KEGG: hif:HIBPF07341 1.1e-136 haeIIIM; modification methylase haeiii K00558; Psort location: Cytoplasmic, score: 8.96.
     0.980
KXB61554.1
KEGG: hpp:HPP12_0045 1.4e-51 ddeM; cytosine specific DNA methyltransferase; K00558 DNA (cytosine-5-)-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
     0.710
KXB70216.1
KEGG: gya:GYMC52_3613 1.3e-117 DNA-cytosine methyltransferase K00558; Psort location: Cytoplasmic, score: 8.96.
 
     0.689
KXB69112.1
NmrA family protein; KEGG: ssr:SALIVB_0958 1.2e-79 ytfG; oxidoreductase ytfG; Psort location: Cytoplasmic, score: 8.96.
       0.634
leuS
leucine--tRNA ligase; KEGG: lba:Lebu_0511 0. leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.538
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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