Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB69008.1Hypothetical protein. (49 aa)    
Predicted Functional Partners:
KXB69009.1
Chorismate binding enzyme; KEGG: lba:Lebu_0832 4.2e-217 anthranilate synthase; K01657 anthranilate synthase component I; Psort location: Cytoplasmic, score: 9.97.
       0.511
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
       0.511
KXB69007.1
PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
       0.497
KXB69011.1
Hypothetical protein; KEGG: zin:ZICARI_100 9.6e-05 nuoJ; putative NADH:ubiquinone oxidoreductase, membrane subunit J; K00339 NADH-quinone oxidoreductase subunit J; Psort location: CytoplasmicMembrane, score: 10.00.
       0.471
KXB69012.1
KEGG: lba:Lebu_0825 6.0e-115 Indole-3-glycerol phosphate synthase; K01609 indole-3-glycerol phosphate synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the TrpC family.
       0.444
trpF
KEGG: lba:Lebu_0824 1.3e-105 phosphoribosylanthranilate isomerase; K01817 phosphoribosylanthranilate isomerase; Psort location: Cytoplasmic, score: 8.96; Belongs to the TrpF family.
       0.422
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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