STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB69041.1Addiction module toxin, RelE/StbE family. (90 aa)    
Predicted Functional Partners:
KXB69040.1
Addiction module antitoxin, RelB/DinJ family.
 
 
 0.969
KXB62985.1
Addiction module antitoxin, RelB/DinJ family; KEGG: isc:IscW_ISCW015998 0.0012 calmodulin, putative; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.870
KXB64702.1
Addiction module antitoxin, RelB/DinJ family.
 
 
 0.869
KXB69042.1
OmpA family protein; KEGG: baf:BAPKO_0749 8.8e-05 papS; polynucleotide adenylyltransferase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme); Psort location: Cytoplasmic, score: 8.96.
       0.634
KXB62227.1
Addiction module antitoxin, RelB/DinJ family; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.551
KXB64439.1
Addiction module antitoxin, RelB/DinJ family.
 
 
 0.540
KXB69043.1
Hypothetical protein.
       0.463
KXB63072.1
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein.
  
 
 0.463
KXB69039.1
Hypothetical protein.
       0.440
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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