Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB68800.1Hypothetical protein; KEGG: pfa:PF11_0464 0.00048 Ser/Thr protein kinase, putative. (282 aa)    
Predicted Functional Partners:
KXB68798.1
Hypothetical protein; KEGG: edi:EDI_282700 0.0030 structural maintenance of chromosomes protein K06669; Psort location: Cytoplasmic, score: 8.96.
       0.463
KXB68799.1
KEGG: abu:Abu_2168 5.4e-11 hypothetical protein K11312.
       0.463
KXB68801.1
Hypothetical protein; KEGG: ame:411809 0.00023 uncharacterized LOC411809; K09880 enolase-phosphatase E1.
       0.417
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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