Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB68827.1BioY family protein; KEGG: apb:SAR116_1163 3.6e-30 biotin biosynthesis protein BioY K03523; Psort location: CytoplasmicMembrane, score: 10.00. (191 aa)    
Predicted Functional Partners:
KXB64111.1
Cobalt transport protein; KEGG: bya:BANAU_0146 8.6e-20 ybaF; putative ABC transporter ATP-binding protein K02008; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.920
KXB59948.1
Cobalt transport protein; KEGG: ljf:FI9785_1499 6.2e-65 ABC transporter permease K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.910
KXB64108.1
KEGG: cpo:COPRO5265_0238 3.8e-58 cobalt import ATP-binding protein CbiO K02006; Psort location: CytoplasmicMembrane, score: 7.88.
   
 0.902
KXB64110.1
KEGG: cpo:COPRO5265_0237 2.2e-60 cobalt import ATP-binding protein CbiO 1 K02006; Psort location: CytoplasmicMembrane, score: 7.88.
   
 0.902
KXB66226.1
BioY family protein; KEGG: apb:SAR116_1163 5.8e-30 biotin biosynthesis protein BioY K03523; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.901
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.683
KXB60890.1
KEGG: rcp:RCAP_rcc02035 0.00012 cbiQ2; cobalt ABC transporter permease CbiQ K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.569
KXB60891.1
Cobalt ABC transporter, ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
   
 
 0.534
KXB68828.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: awo:Awo_c27250 2.0e-43 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
       0.527
KXB68829.1
KEGG: rha:RHA1_ro05622 1.2e-27 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.97.
       0.527
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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