Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB68659.1KEGG: lba:Lebu_0148 2.0e-162 adenine-specific DNA-methyltransferase; K07316 adenine-specific DNA-methyltransferase. (541 aa)    
Predicted Functional Partners:
KXB68660.1
Hypothetical protein; KEGG: lba:Lebu_0148 1.2e-61 adenine-specific DNA-methyltransferase; K07316 adenine-specific DNA-methyltransferase.
     0.994
KXB68662.1
Helicase protein; KEGG: mph:MLP_35860 3.6e-172 putative helicase; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.943
KXB69483.1
Hypothetical protein; KEGG: lba:Lebu_0154 4.2e-272 type III restriction protein res subunit; K01156 type III restriction enzyme; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.835
KXB69484.1
Hypothetical protein; KEGG: lba:Lebu_0154 3.5e-66 type III restriction protein res subunit; K01156 type III restriction enzyme; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.835
KXB69116.1
KEGG: vpr:Vpar_0449 2.1e-270 type III restriction protein res subunit; K01156 type III restriction enzyme.
 
  
 0.835
KXB68661.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.742
KXB68657.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.718
KXB68658.1
Hypothetical protein; KEGG: zin:ZICARI_056 5.4e-05 serS; seryl-tRNA synthetase; K01875 seryl-tRNA synthetase; Psort location: Cytoplasmic, score: 8.96.
       0.718
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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