Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB68616.1Methyltransferase domain protein; KEGG: sml:Smlt3918 5.6e-48 tam; putative trans-aconitate methyltransferase; Psort location: Cytoplasmic, score: 8.96. (249 aa)    
Predicted Functional Partners:
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
  
    0.754
KXB68617.1
Aspartate racemase; KEGG: lba:Lebu_1754 9.7e-115 aspartate racemase; K01779 aspartate racemase; Psort location: Cytoplasmic, score: 8.96; Belongs to the aspartate/glutamate racemases family.
       0.715
KXB68619.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.615
KXB68614.1
KEGG: lba:Lebu_1757 3.0e-255 acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit; Psort location: Cytoplasmic, score: 9.97.
  
    0.515
KXB68615.1
KEGG: lba:Lebu_1756 3.6e-69 acetolactate synthase small subunit; K01653 acetolactate synthase I/III small subunit; Psort location: Cytoplasmic, score: 9.97.
       0.500
KXB64114.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.492
KXB69053.1
Sel1 repeat protein; KEGG: mct:MCR_0405 4.9e-11 hypothetical protein K07126; Psort location: Cytoplasmic, score: 8.96.
 
     0.454
KXB67928.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_01109810 5.8e-08 Tubulin-tyrosine ligase family protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.447
IlvA1
KEGG: lba:Lebu_1758 2.6e-176 threonine dehydratase; K01754 threonine dehydratase; Psort location: Cytoplasmic, score: 9.97.
       0.438
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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