Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Pbp2KEGG: str:Sterm_0178 1.7e-174 penicillin-binding protein 2 K05515; Psort location: CytoplasmicMembrane, score: 9.82. (658 aa)    
Predicted Functional Partners:
KXB69000.1
Penicillin-binding protein, 1A family; KEGG: fnu:FN0525 3.2e-132 penicillin-binding protein; K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.981
MrdB
Rod shape-determining protein RodA; KEGG: cco:CCC13826_0511 1.0e-41 histidinol-phosphate aminotransferase (imidazole acetol-phosphate transaminase) K05837; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
 0.970
KXB69200.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: smf:Smon_0501 2.2e-60 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.917
KXB70023.1
Cell cycle protein, FtsW/RodA/SpoVE family; KEGG: hip:CGSHiEE_06365 5.4e-34 murG; N-acetylglucosaminyl transferase K03588; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
 
 0.893
KXB70019.1
POTRA domain protein, FtsQ-type; Essential cell division protein.
  
 
 0.848
KXB66072.1
Putative Mbl protein; KEGG: lru:HMPREF0538_21740 4.4e-80 ppx6; exopolyphosphatase K03569; Psort location: Cytoplasmic, score: 9.97.
 
 
 
 0.804
KXB70345.1
KEGG: hpo:HMPREF4655_20240 4.1e-68 mreB; rod shape-determining protein MreB K03569; Psort location: Cytoplasmic, score: 9.97.
 
 
 
 0.801
rnj
Hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.754
rsfS
Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
  
    0.751
KXB68095.1
RNA-binding protein, YhbY family; Psort location: Cytoplasmic, score: 8.96.
       0.739
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.