Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXB67928.1Tetratricopeptide repeat protein; KEGG: tet:TTHERM_01109810 5.8e-08 Tubulin-tyrosine ligase family protein; Psort location: Cytoplasmic, score: 8.96. (344 aa)    
Predicted Functional Partners:
KXB59745.1
ATPase, AAA family; KEGG: atm:ANT_16460 6.3e-72 putative ATPase; Psort location: CytoplasmicMembrane, score: 7.88.
  
 0.859
KXB59484.1
Glycosyltransferase, group 2 family protein; KEGG: sez:Sez_0842 0.00040 glycosyltransferase; K12998 glucosyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.857
KXB64075.1
Hypothetical protein.
  
 0.841
KXB67963.1
Tetratricopeptide repeat protein; KEGG: cfu:CFU_0128 1.0e-19 Ser/Thr phosphatase.
 
 
   0.808
pcp
Pyroglutamyl-peptidase I; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.
    
   0.808
KXB59631.1
Sel1 repeat protein; KEGG: cha:CHAB381_0736 3.4e-06 beta-lactamase HcpA K07126; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.792
KXB70088.1
Cyclic nucleotide-binding domain protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.785
KXB59510.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00257190 7.6e-12 TPR Domain containing protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.782
KXB67966.1
Hypothetical protein; KEGG: pfa:PF08_0011 5.2e-07 leucine-tRNA ligase; K01869 leucyl-tRNA synthetase; Psort location: Cytoplasmic, score: 8.96.
  
 0.781
HscC
DnaK family protein; KEGG: bpy:Bphyt_7074 5.0e-95 2-alkenal reductase K04045; Psort location: Cytoplasmic, score: 9.97; Belongs to the heat shock protein 70 family.
  
 0.781
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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