Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXB67933.1Transcriptional regulator, DeoR family; KEGG: ctu:CTU_41720 4.1e-20 yihW; HTH-type transcriptional regulator YihW; Psort location: Cytoplasmic, score: 9.97. (267 aa)    
Predicted Functional Partners:
KXB61931.1
1-phosphofructokinase; KEGG: lba:Lebu_0566 3.1e-150 1-phosphofructokinase; K00882 1-phosphofructokinase; Psort location: Cytoplasmic, score: 9.97; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.750
KXB61933.1
Putative PTS system fructose-specific EIIABC component; KEGG: lba:Lebu_0567 2.8e-275 PTS system fructose subfamily transporter subunit IIC; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.750
KXB59955.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: str:Sterm_3758 4.2e-31 PTS system fructose subfamily transporter subunit IIC; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.732
KXB64694.1
KEGG: lba:Lebu_0586 2.2e-156 tagatose-6-phosphate kinase; K00917 tagatose 6-phosphate kinase; Psort location: Cytoplasmic, score: 9.97; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.730
KXB64689.1
KEGG: hor:Hore_04250 1.0e-41 LacI family transcriptional regulator; Psort location: Cytoplasmic, score: 9.94.
  
  
 0.628
KXB67932.1
Putative fructose-6-phosphate aldolase; KEGG: lba:Lebu_1950 1.3e-119 transaldolase; K00616 transaldolase; Psort location: Cytoplasmic, score: 9.97.
       0.468
KXB68666.1
KEGG: lba:Lebu_2137 1.2e-182 N-acetylglucosamine-6-phosphate deacetylase; K01443 N-acetylglucosamine-6-phosphate deacetylase; Psort location: Cytoplasmic, score: 9.97.
 
    0.430
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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