Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB67950.1Endonuclease/exonuclease/phosphatase family protein; KEGG: rre:MCC_02515 7.8e-09 exodeoxyribonuclease III; K01142 exodeoxyribonuclease III. (257 aa)    
Predicted Functional Partners:
KXB69678.1
KEGG: pfe:PSF113_0041 2.7e-16 Endonuclease/exonuclease/phosphatase family protein K06896; Psort location: Cytoplasmic, score: 9.97.
  
     0.656
KXB67951.1
Glycosyltransferase, group 2 family protein; KEGG: btl:BALH_4931 4.9e-33 glycosyl transferase family protein K00786; Psort location: Cytoplasmic, score: 8.96.
       0.645
KXB67952.1
KEGG: thl:TEH_16170 7.0e-38 putative glycerophosphotransferase; Psort location: CytoplasmicMembrane, score: 7.88.
       0.610
KXB67949.1
Hypothetical protein; KEGG: lsl:LSL_0695 1.9e-22 rfaG; glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.96.
       0.531
KXB67948.1
KEGG: fbr:FBFL15_2432 7.6e-12 putative GNAT family acetyltransferase K00663; Psort location: Cytoplasmic, score: 9.97.
       0.516
KXB67947.1
Hypothetical protein; KEGG: zin:ZICARI_189 0.0013 glyS; putative glycyl-tRNA synthetase subunit beta; K01879 glycyl-tRNA synthetase beta chain; Psort location: CytoplasmicMembrane, score: 9.27.
       0.476
KXB67946.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.445
KXB67938.1
Cysteine desulfurase, SufS subfamily; KEGG: lba:Lebu_0495 4.7e-202 cysteine desulfurase; K11717 cysteine desulfurase / selenocysteine lyase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
    
   0.417
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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