STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB67965.1Hypothetical protein; KEGG: lba:Lebu_0448 2.1e-112 serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: CytoplasmicMembrane, score: 7.88. (299 aa)    
Predicted Functional Partners:
KXB67963.1
Tetratricopeptide repeat protein; KEGG: cfu:CFU_0128 1.0e-19 Ser/Thr phosphatase.
 
 
 0.879
KXB67964.1
Hypothetical protein; KEGG: edi:EDI_048910 1.2e-13 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB67961.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
 
 
 0.610
KXB67966.1
Hypothetical protein; KEGG: pfa:PF08_0011 5.2e-07 leucine-tRNA ligase; K01869 leucyl-tRNA synthetase; Psort location: Cytoplasmic, score: 8.96.
       0.497
KXB67960.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.467
KXB67967.1
Efflux transporter, RND family, MFP subunit; KEGG: edi:EDI_048590 7.9e-08 kinetochore protein NDC80; Psort location: Cytoplasmic, score: 8.96.
       0.461
KXB67962.1
Hypothetical protein.
       0.444
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.