Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXB67967.1Efflux transporter, RND family, MFP subunit; KEGG: edi:EDI_048590 7.9e-08 kinetochore protein NDC80; Psort location: Cytoplasmic, score: 8.96. (419 aa)    
Predicted Functional Partners:
KXB64364.1
Outer membrane efflux protein; KEGG: ccv:CCV52592_0160 0.0038 fadD; long-chain-fatty-acid--CoA ligase K12543; Psort location: OuterMembrane, score: 10.00.
  
 0.768
KXB67231.1
KEGG: lba:Lebu_1817 1.2e-157 DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta; Psort location: Cytoplasmic, score: 8.96.
 
     0.745
KXB67966.1
Hypothetical protein; KEGG: pfa:PF08_0011 5.2e-07 leucine-tRNA ligase; K01869 leucyl-tRNA synthetase; Psort location: Cytoplasmic, score: 8.96.
       0.732
KXB64535.1
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
  
     0.704
KXB64366.1
KEGG: pfe:PSF113_4540 7.5e-92 RND multidrug efflux transporter, Acriflavin resistance protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.701
KXB65504.1
Hypothetical protein; KEGG: edi:EDI_282700 0.0034 structural maintenance of chromosomes protein K06669; Psort location: Cytoplasmic, score: 8.96.
  
    0.682
xseB
Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
  
     0.657
KXB61021.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.646
KXB59417.1
Acetyltransferase, GNAT family; KEGG: str:Sterm_3827 1.7e-23 N-acetyltransferase GCN5; K03789 ribosomal-protein-alanine N-acetyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
    0.636
KXB61020.1
Hypothetical protein; KEGG: mru:mru_1319 0.00010 DEAD/DEAH box helicase domain-containing protein; K03725 archaea-specific helicase.
 
    0.630
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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