Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB67981.1Hypothetical protein. (63 aa)    
Predicted Functional Partners:
KXB67980.1
Hypothetical protein.
       0.773
KXB67982.1
Hypothetical protein.
       0.773
KXB67983.1
Hypothetical protein; KEGG: fnu:FN1331 0.0028 methyltransferase K02493.
       0.773
KXB67979.1
Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 7.6e-28 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
       0.723
KXB67984.1
Hypothetical protein.
       0.529
KXB67985.1
Phage recombination protein Bet; Psort location: Cytoplasmic, score: 8.96.
       0.529
KXB67986.1
Hypothetical protein; KEGG: edi:EDI_048910 4.1e-12 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
       0.519
KXB67987.1
YqaJ viral recombinase family protein; Psort location: Cytoplasmic, score: 8.96.
       0.519
KXB67988.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.519
KXB67989.1
Hypothetical protein.
       0.462
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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