Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB67996.1Putative toxin-antitoxin system, toxin component; Psort location: Cytoplasmic, score: 8.96. (143 aa)    
Predicted Functional Partners:
KXB67995.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.799
KXB67997.1
Hypothetical protein.
       0.520
KXB67998.1
Hypothetical protein; KEGG: pfa:PFD0590c 6.2e-05 DNA polymerase alpha; K02320 DNA polymerase alpha subunit A; Psort location: Cytoplasmic, score: 8.96.
       0.520
KXB67994.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.483
KXB70102.1
Site-specific recombinase, phage integrase family; KEGG: bsr:I33_1800 0.00061 xerC; ATP-dependent protease HslV K03733; Belongs to the 'phage' integrase family.
 
    0.482
KXB67993.1
Hypothetical protein.
       0.480
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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