Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB67868.1Transcriptional regulator, MarR family. (147 aa)    
Predicted Functional Partners:
KXB67867.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.942
KXB67866.1
Hypothetical protein.
       0.746
KXB67865.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: mcu:HMPREF0573_10444 2.0e-132 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.501
KXB67864.1
Response regulator receiver domain protein; KEGG: pmg:P9301_01531 7.5e-37 two-component response regulator K11329; Psort location: Cytoplasmic, score: 9.97.
  
    0.500
KXB64681.1
ABC transporter, substrate-binding protein, QAT family; KEGG: saa:SAUSA300_0707 3.3e-153 osmoprotectant ABC transporter permease K05845:K05846; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.488
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.