STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB67722.1Hypothetical protein; KEGG: scl:sce0774 1.6e-05 gdhB; quinoprotein glucose dehydrogenase. (93 aa)    
Predicted Functional Partners:
KXB67721.1
Putative PTS system mannose-specific EIIAB component; KEGG: lba:Lebu_0457 3.4e-160 PTS system mannose/fructose/sorbose family transporter subunit IIA; K02793 PTS system, mannose-specific IIA component K02794; Psort location: Cytoplasmic, score: 9.97.
       0.524
KXB67720.1
KEGG: llm:llmg_0728 3.2e-93 ptnC; mannose-specific PTS system component IIC K02795; Psort location: CytoplasmicMembrane, score: 10.00.
       0.504
KXB67719.1
KEGG: lla:L147466 2.5e-125 ptnD; mannose-specific PTS system component IID K02796; Psort location: CytoplasmicMembrane, score: 10.00.
       0.475
KXB67718.1
Hypothetical protein.
       0.408
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.