Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB67260.1Hypothetical protein; KEGG: snc:HMPREF0837_11378 8.9e-18 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00. (229 aa)    
Predicted Functional Partners:
KXB67261.1
Putative transcriptional regulatory protein ResD; KEGG: npu:Npun_F5788 1.5e-40 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97.
       0.642
KXB67259.1
Hypothetical protein; KEGG: fnu:FN0736 4.9e-17 methyltransferase.
       0.586
KXB67262.1
Hypothetical protein; KEGG: hpa:HPAG1_0201 0.0058 putative transposase OrfB K07496.
       0.438
KXB69835.1
Chloride transporter, ClC family; KEGG: cpr:CPR_1400 4.8e-18 chloride channel protein K01529; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.425
KXB64668.1
Hypothetical protein; KEGG: btl:BALH_4453 0.00062 DNA-7-methylguanine glycosylase; Psort location: Cytoplasmic, score: 8.96.
 
     0.416
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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