STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB67261.1Putative transcriptional regulatory protein ResD; KEGG: npu:Npun_F5788 1.5e-40 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97. (229 aa)    
Predicted Functional Partners:
KXB61563.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bce:BC3201 2.8e-92 two component system histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 9.99.
 
   0.858
KXB69217.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ova:OBV_10780 8.9e-103 putative two-component histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
  
   0.857
KXB68828.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: awo:Awo_c27250 2.0e-43 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
  
   0.856
KXB64079.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: btl:BALH_2875 1.8e-97 sensor histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88.
 
   0.856
KXB69665.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: awo:Awo_c27250 1.0e-57 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
 0.842
KXB67865.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: mcu:HMPREF0573_10444 2.0e-132 sensor histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
   0.747
CheY
Putative chemotaxis protein CheY; KEGG: cbk:CLL_A0802 8.9e-18 sporulation initiation phosphotransferase F K03413; Psort location: Cytoplasmic, score: 9.97.
  
   
 0.694
KXB67260.1
Hypothetical protein; KEGG: snc:HMPREF0837_11378 8.9e-18 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.642
KXB64520.1
KEGG: lba:Lebu_0381 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.541
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.535
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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