Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB66566.1Hypothetical protein. (146 aa)    
Predicted Functional Partners:
KXB59287.1
Type II/IV secretion system protein; KEGG: cco:CCC13826_1231 2.0e-59 L(+)-tartrate dehydratase subunit beta (L-TTD beta) K02454; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.633
KXB69680.1
Bacterial type II secretion system protein F domain protein; KEGG: apb:SAR116_2517 1.7e-30 type II secretion system PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.617
KXB66565.1
Metallo-beta-lactamase domain protein; KEGG: fnu:FN0900 6.8e-59 metal dependent hydrolase K01567; Psort location: Cytoplasmic, score: 9.97.
       0.561
KXB66564.1
uracil-DNA glycosylase, family 4; KEGG: lba:Lebu_1116 1.6e-75 phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type; Psort location: Cytoplasmic, score: 8.96.
       0.510
KXB66567.1
Ribosome biogenesis GTPase YqeH; KEGG: sah:SaurJH1_1689 1.2e-52 GTP-binding protein YqeH K06948; Psort location: Cytoplasmic, score: 8.96.
       0.465
KXB64131.1
Peptidase, A24 family; KEGG: lba:Lebu_0621 8.7e-59 peptidase A24A prepilin type IV; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
 0.432
KXB70016.1
KEGG: shn:Shewana3_3590 8.5e-13 single-strand binding protein K03111.
   
    0.406
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
  
 0.404
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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