node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXB59300.1 | KXB65504.1 | HMPREF3180_02392 | HMPREF3180_01184 | Putative ribosomal protein S1; KEGG: fnu:FN1781 1.4e-76 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945:K03527; Psort location: Cytoplasmic, score: 9.97. | Hypothetical protein; KEGG: edi:EDI_282700 0.0034 structural maintenance of chromosomes protein K06669; Psort location: Cytoplasmic, score: 8.96. | 0.768 |
KXB59300.1 | KXB68662.1 | HMPREF3180_02392 | HMPREF3180_00692 | Putative ribosomal protein S1; KEGG: fnu:FN1781 1.4e-76 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945:K03527; Psort location: Cytoplasmic, score: 9.97. | Helicase protein; KEGG: mph:MLP_35860 3.6e-172 putative helicase; Psort location: Cytoplasmic, score: 8.96. | 0.854 |
KXB59300.1 | rnr | HMPREF3180_02392 | HMPREF3180_00128 | Putative ribosomal protein S1; KEGG: fnu:FN1781 1.4e-76 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945:K03527; Psort location: Cytoplasmic, score: 9.97. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.590 |
KXB59300.1 | rph | HMPREF3180_02392 | HMPREF3180_01000 | Putative ribosomal protein S1; KEGG: fnu:FN1781 1.4e-76 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945:K03527; Psort location: Cytoplasmic, score: 9.97. | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.871 |
KXB59300.1 | rpsD | HMPREF3180_02392 | HMPREF3180_00461 | Putative ribosomal protein S1; KEGG: fnu:FN1781 1.4e-76 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945:K03527; Psort location: Cytoplasmic, score: 9.97. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.997 |
KXB59300.1 | rpsE | HMPREF3180_02392 | HMPREF3180_00327 | Putative ribosomal protein S1; KEGG: fnu:FN1781 1.4e-76 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945:K03527; Psort location: Cytoplasmic, score: 9.97. | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.995 |
KXB59300.1 | rpsK | HMPREF3180_02392 | HMPREF3180_00460 | Putative ribosomal protein S1; KEGG: fnu:FN1781 1.4e-76 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945:K03527; Psort location: Cytoplasmic, score: 9.97. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.997 |
KXB62180.1 | rph | HMPREF3180_01685 | HMPREF3180_01000 | Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.950 |
KXB65504.1 | KXB59300.1 | HMPREF3180_01184 | HMPREF3180_02392 | Hypothetical protein; KEGG: edi:EDI_282700 0.0034 structural maintenance of chromosomes protein K06669; Psort location: Cytoplasmic, score: 8.96. | Putative ribosomal protein S1; KEGG: fnu:FN1781 1.4e-76 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945:K03527; Psort location: Cytoplasmic, score: 9.97. | 0.768 |
KXB65504.1 | KXB68662.1 | HMPREF3180_01184 | HMPREF3180_00692 | Hypothetical protein; KEGG: edi:EDI_282700 0.0034 structural maintenance of chromosomes protein K06669; Psort location: Cytoplasmic, score: 8.96. | Helicase protein; KEGG: mph:MLP_35860 3.6e-172 putative helicase; Psort location: Cytoplasmic, score: 8.96. | 0.812 |
KXB65504.1 | rnr | HMPREF3180_01184 | HMPREF3180_00128 | Hypothetical protein; KEGG: edi:EDI_282700 0.0034 structural maintenance of chromosomes protein K06669; Psort location: Cytoplasmic, score: 8.96. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.610 |
KXB65504.1 | rph | HMPREF3180_01184 | HMPREF3180_01000 | Hypothetical protein; KEGG: edi:EDI_282700 0.0034 structural maintenance of chromosomes protein K06669; Psort location: Cytoplasmic, score: 8.96. | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.825 |
KXB65504.1 | rpsD | HMPREF3180_01184 | HMPREF3180_00461 | Hypothetical protein; KEGG: edi:EDI_282700 0.0034 structural maintenance of chromosomes protein K06669; Psort location: Cytoplasmic, score: 8.96. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.998 |
KXB65504.1 | rpsE | HMPREF3180_01184 | HMPREF3180_00327 | Hypothetical protein; KEGG: edi:EDI_282700 0.0034 structural maintenance of chromosomes protein K06669; Psort location: Cytoplasmic, score: 8.96. | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.997 |
KXB65504.1 | rpsK | HMPREF3180_01184 | HMPREF3180_00460 | Hypothetical protein; KEGG: edi:EDI_282700 0.0034 structural maintenance of chromosomes protein K06669; Psort location: Cytoplasmic, score: 8.96. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
KXB68662.1 | KXB59300.1 | HMPREF3180_00692 | HMPREF3180_02392 | Helicase protein; KEGG: mph:MLP_35860 3.6e-172 putative helicase; Psort location: Cytoplasmic, score: 8.96. | Putative ribosomal protein S1; KEGG: fnu:FN1781 1.4e-76 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K02945:K03527; Psort location: Cytoplasmic, score: 9.97. | 0.854 |
KXB68662.1 | KXB65504.1 | HMPREF3180_00692 | HMPREF3180_01184 | Helicase protein; KEGG: mph:MLP_35860 3.6e-172 putative helicase; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein; KEGG: edi:EDI_282700 0.0034 structural maintenance of chromosomes protein K06669; Psort location: Cytoplasmic, score: 8.96. | 0.812 |
KXB68662.1 | dnaG | HMPREF3180_00692 | HMPREF3180_00219 | Helicase protein; KEGG: mph:MLP_35860 3.6e-172 putative helicase; Psort location: Cytoplasmic, score: 8.96. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. | 0.401 |
KXB68662.1 | rnr | HMPREF3180_00692 | HMPREF3180_00128 | Helicase protein; KEGG: mph:MLP_35860 3.6e-172 putative helicase; Psort location: Cytoplasmic, score: 8.96. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.406 |
KXB68662.1 | rph | HMPREF3180_00692 | HMPREF3180_01000 | Helicase protein; KEGG: mph:MLP_35860 3.6e-172 putative helicase; Psort location: Cytoplasmic, score: 8.96. | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.638 |