STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB66580.1Putative Peptidoglycan domain protein; KEGG: shb:SU5_0653 8.3e-13 Glycosyl hydrolase lysozyme (N-acetylmuramidase); Psort location: Cytoplasmic, score: 8.96. (329 aa)    
Predicted Functional Partners:
KXB66581.1
Hypothetical protein.
       0.773
KXB66579.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.515
KXB66577.1
Hypothetical protein.
       0.505
KXB66578.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.505
KXB64836.1
OmpA family protein; KEGG: sli:Slin_0746 2.2e-20 V-type H(+)-translocating pyrophosphatase K15987; Psort location: OuterMembrane, score: 9.45.
  
     0.489
KXB64654.1
Hypothetical protein.
  
     0.427
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.