Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB66342.1PASTA domain protein; KEGG: lba:Lebu_2190 1.4e-136 protein PASTA domain-containing protein; K08884 serine/threonine protein kinase, bacterial; Psort location: Cytoplasmic, score: 8.96. (326 aa)    
Predicted Functional Partners:
KXB67960.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.651
KXB67961.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.651
KXB61343.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.651
KXB67963.1
Tetratricopeptide repeat protein; KEGG: cfu:CFU_0128 1.0e-19 Ser/Thr phosphatase.
  
 
 0.580
KXB60459.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.580
rsgA
Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
 
  
 0.531
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
 
   
 0.508
KXB66341.1
Hypothetical protein; KEGG: edi:EDI_341030 6.3e-05 intracellular protein transport protein USO1.
       0.500
sepF
Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
 
   
 0.469
pheT
KEGG: lba:Lebu_2176 0. phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain; Psort location: Cytoplasmic, score: 9.97.
  
    0.420
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.