STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB66221.1ABC 3 transport family protein; KEGG: pfe:PSF113_0030 2.3e-16 znuB; protein ZnuB K09816; Psort location: CytoplasmicMembrane, score: 10.00. (364 aa)    
Predicted Functional Partners:
KXB66223.1
Putative manganese transport system ATP-binding protein MntA; KEGG: lan:Lacal_1142 1.3e-80 phosphonate-transporting ATPase K11710; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.997
KXB66224.1
ABC transporter, substrate-binding protein; KEGG: saj:SaurJH9_2430 1.5e-22 ribulose-phosphate 3-epimerase K01783; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the bacterial solute-binding protein 9 family.
 
 0.988
KXB66222.1
ABC 3 transport family protein; KEGG: apb:SAR116_2225 9.0e-25 zinc ABC transporter membrane spanning protein K09816; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 
0.969
KXB66225.1
Iron dependent repressor, DNA binding domain protein; KEGG: cbm:CBF_3144 0.0091 glycosyl transferase family protein; Psort location: Cytoplasmic, score: 9.97.
  
 0.933
KXB64687.1
ABC transporter, ATP-binding protein; KEGG: lba:Lebu_1062 2.2e-117 ABC transporter; K09817 zinc transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
 0.918
KXB64686.1
ABC transporter, substrate-binding protein; KEGG: saj:SaurJH9_2430 1.0e-32 ribulose-phosphate 3-epimerase K01783; Psort location: CytoplasmicMembrane, score: 7.88.
 
  
 0.831
MntB_1
KEGG: apb:SAR116_2225 3.2e-22 zinc ABC transporter membrane spanning protein K09816; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.504
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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