Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB66071.1Hypothetical protein; KEGG: lba:Lebu_2064 7.9e-152 ATPase; K02341 DNA polymerase III subunit delta'; Psort location: Cytoplasmic, score: 8.96. (317 aa)    
Predicted Functional Partners:
DnaN
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
 
 
 0.987
DnaE
KEGG: lba:Lebu_0463 0. DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha; Psort location: Cytoplasmic, score: 9.97.
 
 0.987
KXB67231.1
KEGG: lba:Lebu_1817 1.2e-157 DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.984
KXB64645.1
Exonuclease; KEGG: lba:Lebu_1206 8.1e-111 exonuclease RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 8.96.
   
 0.957
polC
DNA polymerase III, alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
 
 0.921
dnaX
DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
  
 
0.919
KXB70016.1
KEGG: shn:Shewana3_3590 8.5e-13 single-strand binding protein K03111.
  
 
 
 0.848
KXB66072.1
Putative Mbl protein; KEGG: lru:HMPREF0538_21740 4.4e-80 ppx6; exopolyphosphatase K03569; Psort location: Cytoplasmic, score: 9.97.
     
 0.699
KXB63348.1
KEGG: zin:ZICARI_131 4.1e-45 dnaB; replicative DNA helicase; K02314 replicative DNA helicase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.552
KXB69668.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
 
 
 0.549
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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