STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB66073.1Hypothetical protein; KEGG: bce:BC1788 1.7e-30 lysophospholipase L2 K01048; Psort location: Cytoplasmic, score: 9.97. (296 aa)    
Predicted Functional Partners:
KXB69112.1
NmrA family protein; KEGG: ssr:SALIVB_0958 1.2e-79 ytfG; oxidoreductase ytfG; Psort location: Cytoplasmic, score: 8.96.
 
   0.673
KXB64520.1
KEGG: lba:Lebu_0381 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
   0.651
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
   0.602
KXB66072.1
Putative Mbl protein; KEGG: lru:HMPREF0538_21740 4.4e-80 ppx6; exopolyphosphatase K03569; Psort location: Cytoplasmic, score: 9.97.
       0.450
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.