STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
KXB66003.1Hypothetical protein; KEGG: lba:Lebu_0268 2.0e-43 precorrin-6x reductase; K05895 precorrin-6X reductase. (120 aa)    
Predicted Functional Partners:
cbiD
Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
 
 0.948
KXB60720.1
KEGG: lba:Lebu_0108 2.6e-121 precorrin-4 C(11)-methyltransferase; K05936 precorrin-4 C11-methyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.946
KXB64544.1
KEGG: lba:Lebu_0415 4.7e-115 precorrin-3B C(17)-methyltransferase; K05934 precorrin-3B C17-methyltransferase; Psort location: Cytoplasmic, score: 9.26.
 
  
 0.942
KXB60713.1
KEGG: lba:Lebu_0100 2.5e-107 precorrin-2 C(20)-methyltransferase; K03394 precorrin-2/cobalt-factor-2 C20-methyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.938
KXB60896.1
KEGG: lba:Lebu_0408 2.7e-64 precorrin-6y C5,15-methyltransferase subunit CbiT; K02191 cobalt-precorrin-7 (C15)-methyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.930
KXB60726.1
CbiG protein; KEGG: lba:Lebu_0414 7.0e-144 cobalamin biosynthesis protein CbiG; K02189 cobalt-precorrin 5A hydrolase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.926
KXB60893.1
KEGG: lba:Lebu_0096 5.2e-84 precorrin-8X methylmutase CbiC/CobH; K06042 precorrin-8X methylmutase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.913
KXB60887.1
Cobalt chelatase; KEGG: lba:Lebu_0022 1.9e-102 anaerobic cobalt chelatase; K02190 sirohydrochlorin cobaltochelatase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.857
KXB60895.1
KEGG: lba:Lebu_0508 3.3e-75 precorrin-6y C5,15-methyltransferase subunit CbiE; K03399 precorrin-6Y C5,15-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.851
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
  
  
 0.844
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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