Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB65452.1NLPA lipoprotein; KEGG: pfe:PSF113_0025 1.6e-59 nlpA; protein NlpA K02073; Psort location: CytoplasmicMembrane, score: 7.88. (259 aa)    
Predicted Functional Partners:
KXB65451.1
KEGG: pfe:PSF113_0026 2.1e-41 D-Methionine ABC transporter permease protein K02072; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.986
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 
 0.971
KXB59741.1
ABC transporter, permease protein; KEGG: pfe:PSF113_0026 5.6e-32 D-Methionine ABC transporter permease protein K02072; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.940
KXB59742.1
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
 
 0.874
PepO
Peptidase family M13; KEGG: lba:Lebu_1167 0. endothelin-converting enzyme 1; K07386 putative endopeptidase.
       0.418
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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