Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB64820.1KEGG: chu:CHU_2979 3.3e-16 TPR repeat-containing protein K06026; Psort location: Cytoplasmic, score: 8.96. (276 aa)    
Predicted Functional Partners:
KXB64821.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
     0.974
KXB68782.1
Ankyrin repeat protein; KEGG: isc:IscW_ISCW018512 7.1e-10 ankyrin repeat containing protein; Psort location: Cytoplasmic, score: 8.96.
  
  0.753
KXB64822.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.747
KXB59510.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00257190 7.6e-12 TPR Domain containing protein; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.630
KXB64541.1
Tetratricopeptide repeat protein; KEGG: abu:Abu_0558 3.7e-19 hypothetical protein K07126.
  
 
   0.513
KXB64825.1
Tetratricopeptide repeat protein; KEGG: mct:MCR_0405 8.9e-18 hypothetical protein K07126; Psort location: Cytoplasmic, score: 8.96.
  
   0.483
KXB59484.1
Glycosyltransferase, group 2 family protein; KEGG: sez:Sez_0842 0.00040 glycosyltransferase; K12998 glucosyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.473
KXB64819.1
Peptidase C26; KEGG: fnu:FN0505 9.8e-51 anthranilate synthase component II K07010; Psort location: Cytoplasmic, score: 8.96.
       0.424
KXB64075.1
Hypothetical protein.
   
 0.404
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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