Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB64836.1OmpA family protein; KEGG: sli:Slin_0746 2.2e-20 V-type H(+)-translocating pyrophosphatase K15987; Psort location: OuterMembrane, score: 9.45. (215 aa)    
Predicted Functional Partners:
KXB66580.1
Putative Peptidoglycan domain protein; KEGG: shb:SU5_0653 8.3e-13 Glycosyl hydrolase lysozyme (N-acetylmuramidase); Psort location: Cytoplasmic, score: 8.96.
  
     0.489
KXB61005.1
Putative Peptidoglycan domain protein; KEGG: shb:SU5_0653 4.1e-13 Glycosyl hydrolase lysozyme (N-acetylmuramidase); Psort location: Cytoplasmic, score: 8.96.
  
     0.454
KXB70210.1
Putative Peptidoglycan domain protein; KEGG: shb:SU5_0653 3.9e-12 Glycosyl hydrolase lysozyme (N-acetylmuramidase); Psort location: Cytoplasmic, score: 8.96.
  
     0.448
KXB64520.1
KEGG: lba:Lebu_0381 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
   0.447
BepA
Peptidase, M48 family; KEGG: pit:PIN17_A1849 3.5e-46 peptidase, M48 family.
  
     0.437
KXB69195.1
OmpA family protein; KEGG: pfe:PSF113_0716 5.6e-09 yfiB; protein YfiB.
  
 
0.433
KXB64835.1
Hypothetical protein.
       0.432
KXB64365.1
Efflux transporter, RND family, MFP subunit; KEGG: apb:SAR116_2008 9.8e-15 secretion protein HlyD; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   
 0.407
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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