Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
KXB64622.1Hypothetical protein; KEGG: pfa:PFD0965W 1.6e-05 phosphatidylinositol 4-kinase, putative; Psort location: OuterMembrane, score: 9.49. (660 aa)    
Predicted Functional Partners:
KXB64623.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KXB64624.1
KEGG: lba:Lebu_1145 2.4e-111 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; K11066 N-acetylmuramoyl-L-alanine amidase.
       0.576
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.498
KXB64621.1
Hypothetical protein; KEGG: suh:SAMSHR1132_01930 6.0e-07 hypothetical protein; K01126 glycerophosphoryl diester phosphodiesterase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.411
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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