Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXB64635.1Hypothetical protein; KEGG: lbc:LACBIDRAFT_245630 3.6e-07 hypothetical protein; K06030 mitofusin; Psort location: Cytoplasmic, score: 8.96. (453 aa)    
Predicted Functional Partners:
KXB64638.1
Hypothetical protein; KEGG: ave:Arcve_1463 4.1e-05 CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA; Psort location: Cytoplasmic, score: 8.96.
 
     0.830
KXB64636.1
Hypothetical protein; KEGG: edi:EDI_048910 5.4e-20 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
 
    
0.766
KXB64639.1
Hypothetical protein.
 
     0.677
KXB64637.1
Hypothetical protein.
       0.628
KXB64640.1
Hypothetical protein.
       0.607
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
    
 
 0.539
rpsG
Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
    
 0.519
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.491
KXB64133.1
[acyl-carrier-protein] S-malonyltransferase; KEGG: lba:Lebu_0619 4.5e-142 malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase; Psort location: Cytoplasmic, score: 9.26.
  
   0.490
rpsP
Ribosomal protein S16; KEGG: apb:SAR116_1817 1.1e-14 30S ribosomal protein S16 K02959; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bS16 family.
    
 0.472
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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