Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXB64638.1Hypothetical protein; KEGG: ave:Arcve_1463 4.1e-05 CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA; Psort location: Cytoplasmic, score: 8.96. (1082 aa)    
Predicted Functional Partners:
KXB64636.1
Hypothetical protein; KEGG: edi:EDI_048910 5.4e-20 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
 
     0.935
KXB64639.1
Hypothetical protein.
 
     0.857
KXB64635.1
Hypothetical protein; KEGG: lbc:LACBIDRAFT_245630 3.6e-07 hypothetical protein; K06030 mitofusin; Psort location: Cytoplasmic, score: 8.96.
 
     0.830
KXB64640.1
Hypothetical protein.
       0.786
KXB64637.1
Hypothetical protein.
       0.779
KXB64632.1
Hypothetical protein; KEGG: bqy:MUS_2079 0.00027 transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
 
     0.627
LepA_2
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.
   
   0.554
KXB59686.1
HTH domain protein; KEGG: bqy:MUS_2079 1.4e-08 transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
 
     0.425
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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