STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB64639.1Hypothetical protein. (191 aa)    
Predicted Functional Partners:
KXB64638.1
Hypothetical protein; KEGG: ave:Arcve_1463 4.1e-05 CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA; Psort location: Cytoplasmic, score: 8.96.
 
     0.857
KXB64636.1
Hypothetical protein; KEGG: edi:EDI_048910 5.4e-20 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.848
KXB64640.1
Hypothetical protein.
       0.773
KXB64637.1
Hypothetical protein.
       0.746
KXB64635.1
Hypothetical protein; KEGG: lbc:LACBIDRAFT_245630 3.6e-07 hypothetical protein; K06030 mitofusin; Psort location: Cytoplasmic, score: 8.96.
 
     0.677
KXB63605.1
Hypothetical protein.
    
   0.605
KXB59631.1
Sel1 repeat protein; KEGG: cha:CHAB381_0736 3.4e-06 beta-lactamase HcpA K07126; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.428
KXB59962.1
Putative potassium/sodium efflux P-type ATPase, fungal-type; KEGG: lba:Lebu_0881 0. ATPase; K01537 Ca2+-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.410
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.