Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB64654.1Hypothetical protein. (167 aa)    
Predicted Functional Partners:
KXB65496.1
OmpA family protein; KEGG: sli:Slin_0746 2.1e-10 V-type H(+)-translocating pyrophosphatase K15987.
  
     0.512
KXB61005.1
Putative Peptidoglycan domain protein; KEGG: shb:SU5_0653 4.1e-13 Glycosyl hydrolase lysozyme (N-acetylmuramidase); Psort location: Cytoplasmic, score: 8.96.
  
     0.439
KXB70210.1
Putative Peptidoglycan domain protein; KEGG: shb:SU5_0653 3.9e-12 Glycosyl hydrolase lysozyme (N-acetylmuramidase); Psort location: Cytoplasmic, score: 8.96.
  
     0.430
KXB66580.1
Putative Peptidoglycan domain protein; KEGG: shb:SU5_0653 8.3e-13 Glycosyl hydrolase lysozyme (N-acetylmuramidase); Psort location: Cytoplasmic, score: 8.96.
  
     0.427
KXB64652.1
ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
       0.406
KXB64653.1
KEGG: lba:Lebu_1214 2.7e-135 riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase; Psort location: Cytoplasmic, score: 9.97.
       0.406
KXB69195.1
OmpA family protein; KEGG: pfe:PSF113_0716 5.6e-09 yfiB; protein YfiB.
  
     0.402
KXB69256.1
OmpA family protein; KEGG: pfe:PSF113_0716 9.5e-14 yfiB; protein YfiB; Psort location: OuterMembrane, score: 8.28.
  
     0.400
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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