STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB64553.1Hypothetical protein; KEGG: prw:PsycPRwf_2288 1.9e-05 homoserine kinase; K02204 homoserine kinase type II. (77 aa)    
Predicted Functional Partners:
KXB64554.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.746
KXB64555.1
Peptidase, M23 family; KEGG: ava:Ava_2410 8.5e-06 peptidoglycan-binding protein LysM K08259; Psort location: Cytoplasmic, score: 8.96.
       0.624
KXB64552.1
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
       0.574
cysS
cysteine--tRNA ligase; KEGG: lba:Lebu_2108 5.2e-251 cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.516
KXB64549.1
Hypothetical protein; KEGG: mzh:Mzhil_0975 4.9e-08 ABC transporter; K02013 iron complex transport system ATP-binding protein; Psort location: Cytoplasmic, score: 8.96.
       0.433
KXB64550.1
TIGR02646 family protein; Psort location: Cytoplasmic, score: 8.96.
       0.433
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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