Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
KXB64565.1Hypothetical protein; KEGG: mss:MSU_0820 0.0012 type I site-specific deoxyribonuclease, HsdR family protein; Psort location: Cytoplasmic, score: 8.96. (187 aa)    
Predicted Functional Partners:
KXB64566.1
Acetyltransferase, GNAT family; KEGG: ppy:PPE_04626 7.3e-23 acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
       0.693
KXB64567.1
KEGG: str:Sterm_2426 5.5e-89 prephenate dehydrogenase; K04517 prephenate dehydrogenase.
       0.627
AroF
3-deoxy-7-phosphoheptulonate synthase; KEGG: lba:Lebu_1998 4.7e-170 phospho-2-dehydro-3-deoxyheptonate aldolase; K03856 3-deoxy-7-phosphoheptulonate synthase; Psort location: Cytoplasmic, score: 9.97.
       0.495
KXB64564.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.415
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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