Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AroF3-deoxy-7-phosphoheptulonate synthase; KEGG: lba:Lebu_1998 4.7e-170 phospho-2-dehydro-3-deoxyheptonate aldolase; K03856 3-deoxy-7-phosphoheptulonate synthase; Psort location: Cytoplasmic, score: 9.97. (342 aa)    
Predicted Functional Partners:
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
 
 
 0.990
PheA
Chorismate mutase; KEGG: lba:Lebu_1672 1.2e-182 chorismate mutase; K14170 chorismate mutase / prephenate dehydratase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.956
KXB64567.1
KEGG: str:Sterm_2426 5.5e-89 prephenate dehydrogenase; K04517 prephenate dehydrogenase.
 
  
 0.824
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
  
 0.807
KXB69100.1
KEGG: lba:Lebu_1007 2.2e-149 transketolase; K00615 transketolase; Psort location: Cytoplasmic, score: 9.97.
    
  0.805
KXB69101.1
Transketolase, thiamine diphosphate binding domain protein; KEGG: lba:Lebu_1006 2.2e-147 transketolase; K00615 transketolase; Psort location: Cytoplasmic, score: 9.97.
    
  0.805
Tkt
Transketolase, thiamine diphosphate binding domain protein; KEGG: lba:Lebu_1902 3.1e-134 transketolase; K00615 transketolase; Psort location: Cytoplasmic, score: 9.26.
    
  0.805
KXB66085.1
Transketolase, pyridine binding domain protein; KEGG: lba:Lebu_1901 1.8e-145 transketolase; K00615 transketolase; Psort location: Cytoplasmic, score: 9.97.
    
  0.805
KXB66215.1
Fructose-1,6-bisphosphate aldolase, class II; KEGG: lba:Lebu_2198 3.7e-170 fructose-1,6-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II; Psort location: Cytoplasmic, score: 9.97.
     
  0.800
fda
Fructose-bisphosphate aldolase class-I; KEGG: lba:Lebu_1787 6.6e-148 fructose-1,6-bisphosphate aldolase; K01623 fructose-bisphosphate aldolase, class I; Psort location: Cytoplasmic, score: 8.96.
     
  0.800
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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