Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB64366.1KEGG: pfe:PSF113_4540 7.5e-92 RND multidrug efflux transporter, Acriflavin resistance protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1024 aa)    
Predicted Functional Partners:
KXB64365.1
Efflux transporter, RND family, MFP subunit; KEGG: apb:SAR116_2008 9.8e-15 secretion protein HlyD; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.991
KXB64364.1
Outer membrane efflux protein; KEGG: ccv:CCV52592_0160 0.0038 fadD; long-chain-fatty-acid--CoA ligase K12543; Psort location: OuterMembrane, score: 10.00.
 
 0.982
KXB64843.1
Efflux transporter, RND family, MFP subunit; KEGG: pfe:PSF113_1858 5.9e-09 pyoverdine-specific efflux macA-like protein K13888; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.813
KXB67967.1
Efflux transporter, RND family, MFP subunit; KEGG: edi:EDI_048590 7.9e-08 kinetochore protein NDC80; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.701
KXB61337.1
Hypothetical protein; KEGG: tet:TTHERM_00085110 0.00024 Phosphatidylinositol-specific phospholipase C, X domain containing protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.701
KXB61338.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.701
KXB64842.1
Hypothetical protein; KEGG: edi:EDI_341030 1.5e-08 intracellular protein transport protein USO1; Psort location: OuterMembrane, score: 9.49.
  
 
 0.686
KXB64367.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.677
secD
Export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
  
   
 0.483
KXB70340.1
Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: pfe:PSF113_4167 1.1e-17 exbB; protein ExbB/TolQ K03561; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.442
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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