Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KXB64189.1Universal bacterial protein YeaZ; KEGG: fnu:FN0928 5.1e-22 O-sialoglycoprotein endopeptidase K01409; Psort location: Cytoplasmic, score: 8.96. (254 aa)    
Predicted Functional Partners:
KXB64188.1
Hydrolase, P-loop family; KEGG: efc:EFAU004_00653 3.0e-17 ATPase K06925; Psort location: Cytoplasmic, score: 9.97.
 
 0.997
tsaD
Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
 
 0.946
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
       0.806
KXB64191.1
KEGG: lba:Lebu_0327 7.8e-161 phosphate acetyltransferase; K00625 phosphate acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
       0.778
KXB59285.1
Sua5/YciO/YrdC/YwlC family protein; KEGG: rcm:A1E_05435 1.6e-18 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase K07566; Psort location: Cytoplasmic, score: 8.96; Belongs to the SUA5 family.
    
 0.669
KXB70235.1
TIGR00252 family protein; KEGG: vfi:VF_2212 1.3e-16 yraN; hypothetical protein K07460; Belongs to the UPF0102 family.
 
     0.534
KXB66564.1
uracil-DNA glycosylase, family 4; KEGG: lba:Lebu_1116 1.6e-75 phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type; Psort location: Cytoplasmic, score: 8.96.
  
    0.521
tilS
tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
 
   
 0.489
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.480
KXB60126.1
Acetyltransferase, GNAT family; KEGG: lba:Lebu_1510 9.3e-55 N-acetyltransferase GCN5; K03789 ribosomal-protein-alanine N-acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.478
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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