Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB64131.1Peptidase, A24 family; KEGG: lba:Lebu_0621 8.7e-59 peptidase A24A prepilin type IV; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 9.82. (156 aa)    
Predicted Functional Partners:
KXB64132.1
Prepilin-type cleavage/methylation protein.
  
  
 0.865
KXB64130.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.777
KXB61020.1
Hypothetical protein; KEGG: mru:mru_1319 0.00010 DEAD/DEAH box helicase domain-containing protein; K03725 archaea-specific helicase.
  
     0.716
KXB61021.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.709
KXB67231.1
KEGG: lba:Lebu_1817 1.2e-157 DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta; Psort location: Cytoplasmic, score: 8.96.
  
     0.708
KXB69050.1
DNA protecting protein DprA; KEGG: ccm:Ccan_01460 1.3e-41 protein smf K04096; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.693
KXB64535.1
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
  
     0.643
KXB69680.1
Bacterial type II secretion system protein F domain protein; KEGG: apb:SAR116_2517 1.7e-30 type II secretion system PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.617
KXB61704.1
Hypothetical protein; KEGG: stk:STP_1439 1.6e-08 truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase; Psort location: Cytoplasmic, score: 8.96.
 
     0.616
KXB59287.1
Type II/IV secretion system protein; KEGG: cco:CCC13826_1231 2.0e-59 L(+)-tartrate dehydratase subunit beta (L-TTD beta) K02454; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.579
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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