STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB64076.1Hypothetical protein; KEGG: ddi:DDB_G0273013 0.0031 uglB; uracil glycosylase; K03648 uracil-DNA glycosylase; Psort location: CytoplasmicMembrane, score: 9.82. (229 aa)    
Predicted Functional Partners:
KXB64077.1
Hypothetical protein.
       0.773
KXB64078.1
Putative transcriptional activator protein IrlR; KEGG: cnc:CNE_2c16400 1.9e-47 czcS; sensor protein CzcS K07665; Psort location: Cytoplasmic, score: 9.97.
       0.773
KXB64079.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: btl:BALH_2875 1.8e-97 sensor histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 7.88.
       0.773
KXB64080.1
Peptidase propeptide and YPEB domain protein; KEGG: sar:SAR2716 0.0049 aur; zinc metalloproteinase aureolysin K01401.
       0.773
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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