STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB64112.1Hypothetical protein; KEGG: stj:SALIVA_1154 4.3e-18 signal transduction histidine kinase LytS; Psort location: CytoplasmicMembrane, score: 10.00. (198 aa)    
Predicted Functional Partners:
KXB64111.1
Cobalt transport protein; KEGG: bya:BANAU_0146 8.6e-20 ybaF; putative ABC transporter ATP-binding protein K02008; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.898
KXB64110.1
KEGG: cpo:COPRO5265_0237 2.2e-60 cobalt import ATP-binding protein CbiO 1 K02006; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.886
KXB64108.1
KEGG: cpo:COPRO5265_0238 3.8e-58 cobalt import ATP-binding protein CbiO K02006; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.837
KXB64109.1
Macro domain protein; KEGG: fbr:FBFL15_1840 4.4e-48 putative bifunctional YmdB hypothetical protein/putative ADP-ribosylglycohydrolase; K05521 ADP-ribosylglycohydrolase; Psort location: Cytoplasmic, score: 8.96.
  
   0.563
KXB59510.1
Tetratricopeptide repeat protein; KEGG: tet:TTHERM_00257190 7.6e-12 TPR Domain containing protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.544
KXB64113.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
  0.523
KXB59484.1
Glycosyltransferase, group 2 family protein; KEGG: sez:Sez_0842 0.00040 glycosyltransferase; K12998 glucosyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.473
KXB64114.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.469
KXB64075.1
Hypothetical protein.
   
 0.404
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.