Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB64065.1Nodulation efficiency protein D; Psort location: CytoplasmicMembrane, score: 9.82. (142 aa)    
Predicted Functional Partners:
KXB64064.1
SPFH/Band 7/PHB domain protein; KEGG: reh:H16_A2036 2.5e-52 h16_A2036; membrane protease subunits, stomatin/prohibitin homologs; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.954
cobS
adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
   
    0.664
KXB59959.1
Hypothetical protein; KEGG: tal:Thal_0218 4.2e-05 metal dependent phosphohydrolase K06950.
  
  
 0.602
KXB64063.1
Phospholipase, patatin family; KEGG: bce:BC0759 1.9e-63 Serine protease.
       0.442
KXB64066.1
Hypothetical protein.
       0.437
KXB67231.1
KEGG: lba:Lebu_1817 1.2e-157 DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta; Psort location: Cytoplasmic, score: 8.96.
  
     0.420
KXB64544.1
KEGG: lba:Lebu_0415 4.7e-115 precorrin-3B C(17)-methyltransferase; K05934 precorrin-3B C17-methyltransferase; Psort location: Cytoplasmic, score: 9.26.
  
    0.407
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.