Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KXB63302.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (393 aa)    
Predicted Functional Partners:
KXB70302.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.897
KXB63300.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.777
KXB63301.1
Hypothetical protein; KEGG: arc:ABLL_0373 0.0031 ribonuclease R; K12573 ribonuclease R; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB63308.1
Hypothetical protein; KEGG: lde:LDBND_1068 6.6e-07 prtB; proteinase b; K01361 lactocepin; Psort location: Cytoplasmic, score: 8.96.
 
     0.762
KXB63303.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.757
KXB63304.1
Phage regulatory protein, Rha family; Psort location: Cytoplasmic, score: 8.96.
       0.651
KXB63358.1
Hypothetical protein.
       0.527
KXB63327.1
Phage terminase, large subunit, PBSX family; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.453
KXB63305.1
Hypothetical protein.
       0.438
KXB63357.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.404
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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