STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB63304.1Phage regulatory protein, Rha family; Psort location: Cytoplasmic, score: 8.96. (189 aa)    
Predicted Functional Partners:
KXB63303.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.664
KXB63300.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.651
KXB63301.1
Hypothetical protein; KEGG: arc:ABLL_0373 0.0031 ribonuclease R; K12573 ribonuclease R; Psort location: Cytoplasmic, score: 8.96.
       0.651
KXB63302.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.651
KXB69238.1
Outer membrane protein transport protein, Ompp1/FadL/TodX family; Psort location: OuterMembrane, score: 9.52.
  
     0.517
KXB63305.1
Hypothetical protein.
       0.510
KXB67241.1
Autotransporter beta-domain protein; KEGG: eci:UTI89_C1627 1.9e-92 entS; EntS/YbdA MFS transporter K12516.
  
     0.493
KXB67231.1
KEGG: lba:Lebu_1817 1.2e-157 DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta; Psort location: Cytoplasmic, score: 8.96.
  
     0.491
KXB63358.1
Hypothetical protein.
       0.451
KXB64535.1
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
  
     0.436
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.