Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXB63315.1Hypothetical protein. (382 aa)    
Predicted Functional Partners:
KXB63316.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB63317.1
Putative phage head-tail adaptor; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB63318.1
Hypothetical protein.
       0.773
KXB63319.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB63320.1
Hypothetical protein.
       0.768
KXB63321.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.768
KXB63322.1
Hypothetical protein.
       0.767
KXB63323.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.756
KXB63324.1
Hypothetical protein; KEGG: ddf:DEFDS_1890 5.7e-06 atpF; F0F1-type ATP synthase subunit B K02109; Psort location: Cytoplasmic, score: 8.96.
       0.756
KXB63314.1
Hypothetical protein.
       0.741
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 157687
Other names: CCUG 47505, CIP 107918, DSM 19758, JCM 16777, L. wadei, Leptotrichia sp. LB16, Leptotrichia wadei Eribe et al. 2004, strain LB 16
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